Exports a PageRank result and its edge list as a graph file suitable for visualization in external tools (Gephi, yEd, Graphviz, etc.). Supports GraphML, GEXF (via GraphML with attributes), DOT, and edge list CSV formats.
Usage
export_graph(
pagerank_df,
edge_list_df,
file,
format = c("graphml", "dot", "edgelist", "pajek"),
edge_from_col = "from",
edge_to_col = "to",
pr_url_col = "node_name",
pr_score_col = "pagerank",
node_attrs = NULL,
edge_attrs = NULL
)Arguments
- pagerank_df
A data frame with at least
urlandpagerankcolumns, as returned bypagerank.- edge_list_df
A data frame of edges with from/to columns.
- file
Character, path to the output file.
- format
Character, output format. One of
"graphml","dot","edgelist", or"pajek".- edge_from_col, edge_to_col
Names of from/to columns in
edge_list_df. Default"from"and"to".- pr_url_col
Name of the URL column in
pagerank_df. Default"node_name"(matchingpagerankoutput).- pr_score_col
Name of the PageRank score column. Default
"pagerank".- node_attrs
Optional named list of additional vertex attribute columns from
pagerank_dfto include (e.g.,list(rank = "rank")).- edge_attrs
Optional character vector of additional columns from
edge_list_dfto include as edge attributes (e.g.,"weight").
Examples
edges <- data.frame(
from = c("A", "B", "C"),
to = c("B", "C", "A")
)
pr <- pagerank(edges, clean_edge_urls = FALSE)
# Export to GraphML (for Gephi)
tmp <- tempfile(fileext = ".graphml")
export_graph(pr, edges, file = tmp, format = "graphml")
# Export as DOT (for Graphviz)
tmp_dot <- tempfile(fileext = ".dot")
export_graph(pr, edges, file = tmp_dot, format = "dot")